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AMBER Archive (2009)Subject: RE: [AMBER] mpirun
From: Ross Walker (ross_at_rosswalker.co.uk)
Dear Wen,
> setenv PATH @AMBERHOME/exe:$PATH
I think the @ here should be a $.
> setenv MPI_HOME AMBERHOME
I assume the missing $ on AMBERHOME is a typo in the email here and not in your .cshrc file?
Can you try running
which lamboot
And see what it reports.
> cd cytosine && ./Run.cytosine
This still suggests that you don't have write permission to $AMBERHOME/test and its sub directories.
try
whoami
If the directory is not owned by you will need to get the user that owns it to either chown it to you or adjust the permissions so that you can write to it.
All the best
/\
| Assistant Research Professor |
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