AMBER Archive (2009)Subject: [AMBER] Charge problem
From: Remya S R (amm07bi022_at_students.amrita.ac.in)
Date: Tue May 05 2009 - 06:43:47 CDT
Sir,
I tried the simulation of dna complexed with DB75. When I view the minimized structure of the complex in Xleap, the charge of the ligand appears to be zero. Is this right? Will it be possible for a ligand bound to DNA, to be neutral? Please help me.
Sincerely
Remya S.R
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