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AMBER Archive (2009)Subject: [AMBER] rmsd_ptraj
From: balaji nagarajan (balaji_sethu_at_hotmail.com)
Dear Amber ,
I have looked in to the archive , for calculating rmsd of the trajectory with respect to the first frame
I would like to calculate the rmsd of the trajectory which i have generated in the
I have minimised and equillibriated my model and now i have the
model.rst file and the trajectory file traj.mdcrd
I f so how one should give the ptraj input file
thank you
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